Browse of TCMCG015C05539 protein

CDS

Accession Number	TCMCG015C05539
gbkey	CDS
Protein Id	XP_027093962.1
Location	join(45178701..45179339,45182401..45183036,45183162..45183320)
Gene	LOC113714346
GeneID	113714346
Organism	Coffea arabica

Protein

Length	477aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA506972
db_source	XM_027238161.1
Definition	WD repeat-containing protein WDS homolog isoform X2 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Lissencephaly type-1-like homology motif
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03029        [VIEW IN KEGG] ko04121        [VIEW IN KEGG] ko04131        [VIEW IN KEGG]
KEGG_ko	ko:K17985        [VIEW IN KEGG] ko:K22382        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04137        [VIEW IN KEGG] ko04140        [VIEW IN KEGG] map04137        [VIEW IN KEGG] map04140        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGAGAATTTAATGATTGGGCCCAAAGGCCTCATTAAGAAGCAGGAGTTTGTAAGGATTATTATTCAGTCTATGCATGCTCTTGGATACAGAAAATCTGCTGTCTGTCTGGAAGCTGAATCTGGGATTTCATGCAAATCCGTGGACTTCGAGTCCCTAGAGTCTCACATTCTTAACGCAAATTGGGATGATTGTATTGGCGCTCTTAACAAACTTAAAGGTTTGAGTGATGAAACAAGAGCTTCCGCGTTGTTTATTGTGTTGAAGCAATTTCTGTTGGAGTGTTTGAGTCGCGGCGAGGATGCATTAGCCTTGGAAGTACTAAGGAAGCAGGTTGCTGGGTTGTGGATGGGAAAAGAGAAGGTGCATAATTTGGCTGTTGGATTGCTTTTCCTGAAGGAGCTGGGGTCGAATAAGATCGATAATGGTATTATTCAGGAATTTAGAAAAAGAATGATCATTGACTTGGAAAACGTGCTTCCACCTCCCATAACACTTCCAGAGAGAAGGTTAGAGCATTTGGTTGAAATGGCTGTAAGTGCCCAGGTAGATAATTGTACGTATCACACTTCCGATGCAATCACACTTTATGAAGACCACCACTGTGGCAGGGACCATTTTCCCAGTGAGACTGTTCAGGTGCTGGAAACTGGCAAAGTAACACAAAAGCACACACTAAAAAGCCACCAAAACCCTGTCTCATTCGTAGCATGGAGTCCTGATGATACCATGTTGCTAACCTGTGGAAACATGGAGGTGCTCAAACTCTGGGATGTGGAGACAGGTATATGCAAGCACACATATGGCAATGATGGTTTCATTGTCACCTCATGTGCTTGGTTTCCTGATTCTAAGCGGCTCGTCTGTGGCAGCTCTGATCCTGAGAAGGGTATCTACATGTGGGACTCTGAAGGCAACGAGATTAAAGCATGGAAAGGAGTACGGATGCCCAAAGTTTCAGACATTGCTGTCACACCTGATGGACAACATCTTATCAGCATATTTTCGGACAAGGAAATCCACATATTAAATTTGCAGACTAATGCTGAACGTGTCATTTCAGAGCAGCATTCAATCACATCTCTTTCTGTATCTGGAGATAACAAGTTCTTTATTGTAAACCTCAACAGCCAGGAGATTCATATGTGGGATGTTGCAGGGAAGTGGGTAAAACCACGGAAGTACGCGGGCCACATGCAGCAGAAGTATGTGATACGTTCTTGCTTTGGTGGGTTGAACAGTAGATTTATCGCAAGTGGCAGTGAAGATTCACAGGTCTACGTGTGGAATCAACTGAGTTCTTATCCGATTGAGATCCTATCTGGTCATCTCATGACCGTGAACTGTGTGAGCTGGAATCCTAGGAGGCCTCAGATGTTGGCTTCAGCAAGTGATGATCAGACAGTCCGAATATGGGGTCCAAACTGTTTTTAA

Protein:   MENLMIGPKGLIKKQEFVRIIIQSMHALGYRKSAVCLEAESGISCKSVDFESLESHILNANWDDCIGALNKLKGLSDETRASALFIVLKQFLLECLSRGEDALALEVLRKQVAGLWMGKEKVHNLAVGLLFLKELGSNKIDNGIIQEFRKRMIIDLENVLPPPITLPERRLEHLVEMAVSAQVDNCTYHTSDAITLYEDHHCGRDHFPSETVQVLETGKVTQKHTLKSHQNPVSFVAWSPDDTMLLTCGNMEVLKLWDVETGICKHTYGNDGFIVTSCAWFPDSKRLVCGSSDPEKGIYMWDSEGNEIKAWKGVRMPKVSDIAVTPDGQHLISIFSDKEIHILNLQTNAERVISEQHSITSLSVSGDNKFFIVNLNSQEIHMWDVAGKWVKPRKYAGHMQQKYVIRSCFGGLNSRFIASGSEDSQVYVWNQLSSYPIEILSGHLMTVNCVSWNPRRPQMLASASDDQTVRIWGPNCF